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Getting Started
About
Installation
Dependencies
Quickstart Tutorial
API Documentation
pysap
pysap.apps
pysap.base
pysap.base.loaders
pysap.base.loaders.fits
pysap.base.loaders.loader_base
pysap.base.loaders.mat
pysap.base.loaders.nifti
pysap.base.loaders.numpy_binary
pysap.base.loaders.tif
pysap.base.exceptions
pysap.base.image
pysap.base.io
pysap.base.observable
pysap.base.plugins
pysap.base.transform
pysap.base.utils
pysap.extensions
pysap.extensions.formating
pysap.extensions.sparse2d
pysap.extensions.tools
pysap.extensions.transform
pysap.extensions.wrapper
pysap.plotting
pysap.plotting.image
pysap.plotting.transform
pysap.plotting.utils
pysap.plugins
pysap.configure
pysap.data
pysap.info
pysap.utils
astro
astro.deconvolution
astro.deconvolution.deconvolve
astro.deconvolution.linear
astro.deconvolution.wavelet_filters
astro.denoising
astro.denoising.denoise
astro.denoising.noise
astro.denoising.wavelet
astro.tests
astro.tests.test_denoising
etomo
etomo.operators
etomo.operators.fourier
etomo.operators.fourier.fourier
etomo.operators.fourier.utils
etomo.operators.gradient
etomo.operators.gradient.gradient
etomo.operators.linear
etomo.operators.linear.HOTV
etomo.operators.linear.base
etomo.operators.linear.utils
etomo.operators.linear.wavelet
etomo.operators.radon
etomo.operators.radon.radon
etomo.operators.utils
etomo.optimizers
etomo.optimizers.utils
etomo.optimizers.utils.cost
etomo.optimizers.utils.reweight
etomo.optimizers.forward_backward
etomo.optimizers.primal_dual
etomo.reconstructors
etomo.reconstructors.base
etomo.reconstructors.forwardtomo
etomo.info
mri
mri.generators
mri.generators.base
mri.generators.cartesian
mri.operators
mri.operators.fourier
mri.operators.fourier.utils
mri.operators.fourier.base
mri.operators.fourier.cartesian
mri.operators.fourier.non_cartesian
mri.operators.fourier.online
mri.operators.fourier.orc_wrapper
mri.operators.gradient
mri.operators.gradient.base
mri.operators.gradient.gradient
mri.operators.gradient.online
mri.operators.gradient.utils
mri.operators.linear
mri.operators.linear.dictionary
mri.operators.linear.utils
mri.operators.linear.wavelet
mri.operators.proximity
mri.operators.proximity.ordered_weighted_l1_norm
mri.operators.proximity.weighted
mri.operators.utils
mri.operators.base
mri.optimizers
mri.optimizers.utils
mri.optimizers.utils.cost
mri.optimizers.utils.reweight
mri.optimizers.base
mri.optimizers.forward_backward
mri.optimizers.primal_dual
mri.reconstructors
mri.reconstructors.utils
mri.reconstructors.utils.extract_sensitivity_maps
mri.reconstructors.base
mri.reconstructors.calibrationless
mri.reconstructors.self_calibrating
mri.reconstructors.single_channel
mri.scripts
mri.scripts.gridsearch
mri.info
References
Examples
PySAP Examples
PySAP Basics
Galaxy Image Denoising
Galaxy Image Deconvolution
Neuroimaging cartesian reconstruction
Cartesian Self Calibrating Reconstruction
Cartesian Calibrationless Reconstruction using GroupLASSO Regularizer
3D Neuroimaging cartesian reconstruction
Cartesian Calibrationless Reconstruction using OWL Regularizer
GPU Non-cartesian 2D reconstruction: Undecimated Wavelet
Grid Search Launch
GPU Density Compensation Reconstruction Comparison
GPU non-cartesian reconstruction with SENSE
Auto Thresholded cartesian reconstruction
Related Projects
ModOpt
Sparse2D
Guidelines
Contributing
Citing this Package
repository
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Contents
Submodules
etomo.reconstructors
Contents
Submodules
etomo.reconstructors
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Submodules
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etomo.reconstructors.base
etomo.reconstructors.forwardtomo